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When gene therapy saves lives… but also poses new risks

The dilemma of advanced medicine: the discovery of a brain tumor in a clinical trial reopens the debate on the safety and long-term follow-up of viral vectors

When gene therapy saves lives… but also poses new risks

Gene therapy has been touted for years as one of the most promising frontiers of contemporary medicine. The possibility of correcting hereditary diseases by introducing functional genes opens up previously unimaginable horizons for devastating pathologies. However, a recent clinical case has reignited a concern that dates back to the very beginning of this technique: can gene therapy itself trigger cancer?

An article published in the journal  Science  recounts the case of a child who developed a brain tumor years after receiving experimental gene therapy based on adeno-associated viruses (AAVs). The finding has generated scientific and ethical debate, not because it invalidates the enormous potential of these therapies, but because it forces a reconsideration of their risks and the need for long-term monitoring.

The clinical case

The patient suffered from mucopolysaccharidosis type I (MPS I or Hurler syndrome), a rare and serious genetic disease. This condition causes the accumulation of toxic substances in multiple organs and often leads to progressive neurological deterioration and premature death.

Faced with the failure of a conventional transplant, doctors turned to experimental gene therapy. For this, they used a modified AAV9 virus, designed to carry a functional copy of the defective gene to the cells of the central nervous system. The virus was administered into the cisterna magna region, allowing the viral vector to reach the cerebrospinal fluid and the brain.

For several years the treatment appeared successful. The child showed clinical improvement and neurological stability. However, approximately four years later, follow-up examinations detected a neuroepithelial brain tumor.

The molecular discovery

The most striking thing was not only the appearance of the tumor, but what the researchers found when they analyzed it genetically.

Scientists identified fragments of the viral vector integrated into the DNA of tumor cells. Furthermore, they found integration close to the PLAG1 gene, an oncogene associated with cell proliferation and tumor development. The formation of a hybrid transcript between viral sequences and this gene was also detected, suggesting a possible causal mechanism.

Until now, AAV vectors were considered relatively safe because, unlike other viruses used in gene therapy, they usually remain outside the cellular genome and rarely integrate into it. This is precisely why they had gained so much popularity in clinical trials and approved treatments.

This case constitutes one of the first solid pieces of evidence that, in exceptional circumstances, vector integration could contribute to tumor development.

A rare but real risk

The researchers themselves emphasized that the finding should not be interpreted as a blanket condemnation of gene therapy. Thousands of patients have received AAV-based treatments without developing related tumors.

Furthermore, the clinical context is important: the child suffered from a life-threatening illness, and the available treatment options also carried significant risks. In fact, following surgical resection of the tumor, the patient continues to live and enjoy a good quality of life.

This raises a common dilemma in experimental medicine: when the disease is devastating and fatal, even significant risks may be acceptable if the treatment offers a reasonable chance of survival or improvement.

A historical background

Concerns about the safety of gene therapy are not new. In 1999, the death of Jesse Gelsinger during a clinical trial profoundly impacted the field’s development. The young man suffered a massive inflammatory reaction after receiving an experimental viral vector, an event that halted numerous projects for years.

Subsequently, some children treated for immunodeficiencies developed leukemia due to genetic insertions near oncogenes, leading to the redesign of multiple therapeutic vectors.

Furthermore, in 2009, an extraordinary case was described of tumors derived from fetal stem cells experimentally implanted in a child with ataxia telangiectasia. Analysis demonstrated that the tumor cells originated from the donors and not from the patient himself.

These episodes serve as a reminder that advanced biotechnological therapies, although promising, are never completely free of unforeseeable risks.

The need for long-term follow-up

One of the key messages of this case is the importance of long-term monitoring. Many serious adverse effects do not appear immediately, but rather years after treatment.

Therefore, the researchers emphasize the need for prolonged clinical and molecular surveillance in all patients undergoing gene therapy, especially when using viral vectors capable of occasionally integrating into the genome.

The discovery could also spur the development of safer technologies, including more precise gene-editing systems, vectors with lower integration capacity, and non-viral strategies.

A bioethical challenge

Beyond the technical aspects, the case has a clear bioethical dimension. Gene therapy constantly faces the challenge of balancing innovation with prudence. Patients and their families often accept very high risks when the disease threatens life or neurological function.

However, informed consent in these contexts must be especially rigorous. Potential risks—even if rare or uncertain—must be clearly explained, including the possibility of long-term effects that are not yet fully understood.

At the same time, these kinds of events should not fuel an indiscriminate rejection of gene therapy. The history of medicine shows that many transformative advances went through initial phases of uncertainty and complications before reaching adequate levels of safety.

Conclusion

The case of the child whose brain tumor appears to be linked to an AAV-based gene therapy represents a significant moment for modern medicine. It does not destroy the hopes placed in gene therapy, but it does serve as a reminder that intervening in the human genome requires extreme caution.

Contemporary biotechnology offers extraordinary possibilities for treating previously incurable diseases. However, the more powerful a medical technology is, the greater the scientific, ethical, and clinical rigor with which it is applied must also be.

The main lesson is not to abandon gene therapy, but to understand that genuine biomedical progress simultaneously requires innovation, transparency, and continuous vigilance.

Jaime Millás

Licenciado en Ciencias Biológicas, por la Universidad de Valencia (España), ciudad donde nació en 1953, es licenciado en Ciencias de la Educación por la Universidad de Piura (Perú) y Máster en Dirección de Instituciones Educativas por el Centro Universitario Villanueva, adscrito a la Universidad Complutense de Madrid. También es Máster en Bioética por la Universidad de Murcia (España) y Doctor en Bioética por la Universidad Católica de Valencia (España) con una tesis sobre “Reflexión bioética sobre la opinión de los médicos peruanos acerca de la aplicación de la terapia con células madre en clínicas de Latinoamérica” (Sobresaliente Cum Laude). En Valencia fue subdirector del Colegio Mayor “Albalat” y, tras fijar su residencia en el Perú, en 1977, director de varios Centros Culturales de Lima y del Colegio Alpamayo desde 1988 hasta 2004. Ha sido vicepresidente del Centro de Orientación Familiar (COFAM) y trabajó en la oficina de proyectos de la Asociación para el Desarrollo de la Enseñanza Universitaria (ADEU), entidad promotora de la Universidad de Piura. Asimismo ha sido secretario de la Asociación Civil “Piura 450”, promotora de colegios en Chiclayo y Piura. También ha sido director del Colegio “Turicará” de Piura entre los años 2005 y 2012. Actualmente se desempeña como presidente del Comité Institucional de Ética en Investigación de la Universidad de Piura. Director del Departamento de Ciencias Básicas y Bioética, y director de Estudios de la Facultad de Medicina de la Universidad de Piura. Coautor del libro “Bioética en Investigación. Fundamentos, principios, aplicaciones”. Y autor de otros libros de Bioética y educación, así como artículos de Bioética en revistas indexadas.